Category Archives: General

Microscopy – reflectance imaging of a modified camera sensor

It’s always the same when I attempt some DIY – I start out with a plan, and a pile of bits, and I invariably end up with parts left over at the end, and a nagging question about where they should have gone. It’s been a little like that with Project Beater, my microscope build. As I’ve gone along buying spare parts for it and bits of donor equipment, I’ve ended up with some stuff which I wasn’t really sure what to do with. A couple of weeks ago it dawned on me that I almost had enough parts to make a reflection microscope, to go along with the transmission setup I already had. So back on eBay (for a few more missing parts) and that is precisely what I did….

Reflection microscopy relies on top illumination and is used for non-transparent samples. It’s often used for looking at gems, metals, feathers, fabrics, etc etc. Before I show you a picture of the setup though, here’s one of the sample pictures I took to try it out once it was assembled. I’ll leave you to figure it out what it is for now, and come back to it later…..

Can you tell what it is yet?

My setup was based around an Olympus BHM chassis, a reflected light setup placed on top of the microscope, and then a normal or trinocular head on top of that (depending on whether or not I want to take photos). The objectives are old Olympus Neo ones, designed specifically for this type of ‘top down’ imaging as they have a channel around the lens to allow the light to be shone down there rather than through the objective itself. Here’s what it looks like from above.

Olympus BHM reflection microscope setup

The original light source is a 15W 6V Tungsten filament bulb, but these are both expensive and difficult to source now, and give a very warm colour cast to the image, so instead I just used a 10W cool white LED source I built previously. This gives out plenty of light, and with very little colour cast. Plus it has the added benefit of being virtually immortal.

So, back to the test object. Did you figure out what it is? Here it is in its entirety.

44 Remington Magnum inert round

The image was one of the ‘4’s from an inert 44 Remington Magnum round, taken with a 10x Neo objective, imaged using a camera phone through the eyepiece (overall magnification 100x).

While looking at old brass is one use for these types of microscopes, I did have a different use in mind when I built it. I have some monochrome converted cameras for my UV work, and for a while I’ve been wanting some nice pictures of a camera sensor to show what it looks like as a result of the conversion. So I got a damaged sensor which had been partially converted to monochrome, and as a result had regions which were left untouched, regions which had the microlenses removed, and other parts which had had the microlenses and Bayer filter removed. Here it is (with the area where the Bayer filter has been removed to the left of centre);

What does a camera sensor look like in its normal form? Here we have a reflection image of the sensor from part of it which hadn’t had anything removed, taken with a 40x Neo objective.

Camera sensor including microlenses and Bayer filter

You can see the very neat arrangement of red, green and blue filtered pixels (2 green to 1 red and 1 blue). On top of each coloured region is a microlens. This focuses the incoming light through the coloured filter and into the sensor to be collected. In a conversion to monochrome, these microlenses and the Bayer filter are removed, leaving the bare sensor behind. Here you can see what it looks like as the microlenses start to be removed.

Microlenses partly removed.

And then, with the microlenses fully removed.

Microlenses removed

With the microlenses removed, you can now see the coloured squares of the Bayer filter. Oddly enough the green ones look smaller than the red and blue ones, and I’m not quite sure why that would be the case. With the monochrome conversion, this coloured filter layer is also removed, and the bare sensor is revealed.

Monochrome converted region

With the monochrome conversion, all trace of the coloured Bayer filter is now gone. It also reveals why the microlenses play an important role in the sensor design. The darker squares are, I believe, the sensitive parts of the pixels. The microlenses gather light from a larger area than the pixel itself, and focus it down into the sensor to be collected. Sensor architecture also plays a significant role in their effectiveness at this task, but that is a story for another day…

The sensor I had for imaging was damaged, and quite fascinating to look at under the microscope. I found a region where something sharp had been dragged across it, scraping away the microlenses and Bayer filter, revealing the sensor underneath. It enables the different regions to be captured in one image – raw, untouched, sensor with microlenses, microlenses partly removed, microlenses completely removed from the Bayer filter, and bare sensor with the Bayer filter removed – as shown in the image below taken with a 20x Neo objective.

Scratched surface of the camera sensor

As a quick note for the microscopists amongst you, I used bright field imaging for these images. With this the light is directed down the objective optics, before being reflected back up along the same path. This reduces the image contrast somewhat. The Neo objectives have a path around the edge of the optics for the light to travel, ending up with an image which I suppose is a bit like a dark field transmission image, but I did not use there here as the bright field illumination photos looked nicer.

When you start on a new adventure, it isn’t always clear where you are going to end up. When started with microscopy about 6 months ago, I’d assumed I would be doing transmission imaging. By learning as I go along, I’ve now ended up with a reflection microscope, which has allowed me to visualise what I had theorised about when writing about monochrome camera conversions and UV imaging. As scientists we should always be open to letting the work guide us, in addition to just ‘running the experiment’.

Thank you for reading, and if you’d like to know more about this or any of my other areas of work, I can be reached here.

UV leakage through stock camera sensor filters

When it comes to UV fluorescence photography, setting up of the lighting, subject and imaging system are key to getting good results. An important part of this is knowing how your equipment works, along with its limitations. Today I’d like to share the results of testing which show how UV is leaking through the internal filter stacks of some of my cameras, and how that effect can be rectified.

This all came about when I first measured the transmission spectra of the filters which were removed from a camera I was having converted to multispectral imaging (a Canon EOS 5DSR). The filter stack consisted of a green IR blocking filter, and a dichroic ICF filter which is supposed to block UV and IR. However when I measured the transmission through the two filters I got the following spectra.

Transmission through Canon EOS 5DSR internal filters

What was worrying was the ICF filter had a significant UV transmission peak at around 365nm, which means that UV light can actually reach the sensor in a stock camera (the red line is the combined transmission through both filters). This got me wondering what the end result of this type of leakage would be in a fluorescence image.

Fast forward about a year, and I was doing some fluorescence imaging for an article, which was using UV light to look at the fluorescence of a glass vase, and seeing what the effects of different blocking filters on the camera lens were. A quick guide to the setup. Light source was a Hamamatsu LC8 with a 200W Xe lamp. A Baader U was used on the output of the light source, to make it UV only and remove the small amount of visible and IR light being emitted. Subject was a painted glass vase, placed in a box painted with Semple Black 2.0 paint which I’ve found to be both highly light absorbing and very low fluorescence making it ideal for UV imaging work. Camera was a stock, unmodified Canon EOS 6D with a Rayfact 105mm UV lens. Imaging was done in the dark apart from the UV light source (obviously). All exposures where for the same length of time.

Firstly, the vase imaged with no filtration on the camera lens.

Vase fluorescence under UV light, with no lens filter

The vase shows the expected blue fluorescence, but there seem to be red areas in the image and they look to be reflection rather than fluorescence based on the parts of the glass they are showing up on. It is also red on some of the black painted cardboard. The ever present dust also shows up with blue fluorescence (damn you, optical brighteners).

The next stage was to add a UV blocking filter to the front of the camera lens. First one was the Schott KV418 which is well known in the UV fluorescence imaging world as having good UV blocking and low inherent fluorescence.

Vase fluorescence under UV light, imaged with a KV418 blocking filter

Adding the Schott KV418 to the front of the camera lens removed the areas which appeared red in the unfiltered image, confirming my suspicions that those areas where to do with UV reflection which was making its way through the stock internal camera filters and hitting the sensor.

As a final confirmation that reflected UV was indeed the cause of the red highlights in the unfiltered image, I removed the Schott KV418 filter and replaced it with a LaLa U filter from UVIROptics. This filter lets UV through, but very effectively blocks visible and IR light, and is a great choice for UV photographers. Doing so, gave this image.

UV image of the vase, using a LaLa U filter

Using the LaLa U filter, the blue fluorescence is now gone (as expected as the filter is blocking the visible light), but the red still remains in the areas shown in the original unfiltered image. It is a little darker as the LaLa U filter is absorbing around half of the UV light, due to its transmission curve. Remember, this is a stock camera with internal filters which are supposed to be blocking UV.

Ok, so it is fairly obvious that the stock Canon EOS 6D filtration is not enough by itself to block reflected UV light with the fluorescence images. Schott KV418 is good at blocking that reflected UV, but, Schott KV418 is no longer widely available (and do you homework on anyone claiming to be selling it – the only legitimate source I know of was ITOS in Germany, and I’m not even sure they have any anymore). However I found that Zeiss T* UV filters also did a good job of blocking the UV and were themselves low fluorescence. This is what the vase looked like when imaged with using a Zeiss T* filter on the camera lens.

Vase fluorescence under UV light, imaged with a Zeiss T* UV blocking filter

As a final image, and why not, here is the vase imaged using a Tiffen 12 yellow filter, as the blocking filter.

Vase fluorescence under UV light, imaged with a Tiffen 12 filter

The Tiffen 12 image doesn’t really add to the story, I just think it looks funky.

So, some comments on the images and the experiment above. The transmission spectra for the filters I have was for a Canon EOS 5DSR, and the photos were taken using a Canon EOS 6D. The cameras were different, and I do not have the filter stack from a 6D to check. I therefore cannot be sure that it would be exactly the same as the 5DSR one. However the images back up the hypothesis that the stock filters are leaking some UV. I used a Rayfact 105mm UV lens for the images. That is a nice sharp macro lens, but has high UV transmission, which emphasizes any UV leakage. I have done some other work with different (normal) camera lenses, and the effect is still visibly, although reduced in intensity. I used a Zeiss T* UV filter for one of the images. Not all UV filters block UV – some are just plain glass. Unfortunately this is an example of where marketing trumps science, and claims are made about products which do not stand up to testing. In the absence of owning a spectrometer, if you shine a UV torch (which has the black looking filter on it to remove visible light) through a UV filter onto white paper, if the UV filter is not blocking the UV light then the paper will fluoresce. If the paper does not fluoresce then the UV filter is blocking the UV light, giving you a rough indication of how good a blocking it has. This of course needs to be done in the dark.

I should note that I have tested some Nikon and Sony sensor filters stacks for transmission, and the ones I tested at least showed much less UV leakage than the Canon ones, so not all cameras behave the same.

My message to you here, is that it is good practice to ALWAYS use an external UV blocking filter in front of the camera lens when doing UV fluorescence imaging. While it is easy to say that the internal filters on digital cameras are designed to block UV light, that internal filtration setup is not always sufficient. Knowing how your kit works is vital to generating good reliable scientific images for your work, as is understanding its limitations. When you understand what it can and can’t do, you are in a much better place to explain any unusual or unexpected results. I hope you enjoyed reading this, and if you’d like to know more about this or other aspects of my work, you can reach me here.

UV Microscopy – Lomo UV 10x 0.2 objective

Dedicated UV imaging kit is often really expensive. Small production runs and exotic materials such as quartz and calcium fluoride for the optical components tend to push costs way up. However not everything is prohibitively expensive, and the UV experience can be had for relatively little outlay is you shop smartly. So I present the Lomo UV 10x 0.2 microscope objective.

This little objective has an RMS thread, and is for finite tube microscopes. I found one on eBay and including delivery is was less than 100USD. Here’s the objective.

Lomo UV 10x objective
Lomo UV 10x objective

This Lomo objective lens is tiny. Here it is next to my Olympus UVFL 10x.

Lomo UV 10x vs the Olympus UVFL 10x

And here it is mounted on my Olympus BHB microscope.

Lomo UV 10x on the microscope

How does it perform? I think OK is about the best way to describe it. The lens shows some softness towards the edge of the image, as shown by the photo below of a skin sample with hair roots which was taken through the eyepiece of my Olympus.

Lomo UV 10x image through the eyepiece

Thing is these Lomo objectives were meant to be corrected by using the right Lomo eyepiece. Thankfully I have a Lomo UV correcting photoeyepiece for this objective, so images taken the right way through the trinocular should be a lot sharper across the image…..

So far what do we have? A little lens with a OK (but not stellar) performance. However this is where the Lomo plays its Joker – its transmission in the UV. I measured the lens transmission between 280nm and 420nm and got this.

Lomo UV 10x transmission between 280nm and 420nm

The transmission curve for the objective shows that it is not a normal glass lens. This is behaving like my Leitz UV and Zeiss Ultrafluar objective lenses, and is made from quartz instead of glass. Although I cannot measure below 280nm with my setup, I reckon this will have good transmission down to below 250nm. As such it is suitable for UVB and even UVC microscopy.

Good things come in small packages as they say, and that is certainly true with this little Lomo. This tiny little objective is a very cost effective way to try out the world of UV microscopy, offering great transmission far down in to the UV region, and I’ll definitely be using this in my UV microscope project. If you want to know more about this or any other aspect of my work you can reach me here.

UV Microscopy – Slides and coverslips

“It’s just the little things, the incidentals….”

While I was at University one of my favourite bands was Alisha’s Attic, and like many I still enjoy putting the old CDs on and listening to music from what feels like a lifetime ago. The line above is from one of their songs, called (not surprisingly) The Incidentals. It came to mind as I was thinking about writing this piece that the world of UV imaging is like this. Simple things which we don’t worry too much about in visible light imaging can have huge impact when working in the UV. So, without further ado, I present the case for the humble microscope slide and coverslip…..

When it comes to microscopy, there’s little which can be thought of as simpler than these items. Pieces of glass used to mount the sample, we take them out of the box, give them a little clean, and then that’s about it. But for UV imaging glass has a bit of a problem. Depending on the wavelengths you use, it isn’t always transparent, which if you’re trying to get light to go through it is a bit of a problem.

UV lighting can be done in number of ways, but one of the common routes for microscopy is to use mercury xenon lamps. These have high UV output, with some very very strong narrow bands superimposed on a broad background of emission. Using filters, you can get narrow UV bands which can be used for both transmission and fluorescence imaging. So what do glass slides look under UV, and how does wavelength impact how they behave?

To compare with the glass slides and coverslips, I sourced some quartz and fused silica components from UQG Optics, who I get some of my optical filters from. For my testing I had 5 coverslips and slides; a. Standard 1.1mm thick glass slide, b. standard 0.17mm thick glass coverslip, c. Quartz microscope slide 1mm thick, d. UV fused silica 0.35mm thick coverslip, and e. Quartz 0.17mm thick coverslip.

The first set of images is how they behave with UV transmission. For imaging I used my monochrome converted Nikon d850 camera, a Rayfact 105mm UV lens, and Edmund Optic OD4 band pass filters (313nm or 365nm). Light source was a 200W Hamamatsu LC8 mercury xenon lamp. Slides were imaged against a white paper background.

Here’s how they look at 313nm (UVB region).

Glass (a. and b.) and UV fused silica/quartz (c., d. and e.) at 313nm

And, now the same slides/coverlips imaged at 365nm.

Glass (a. and b.) and UV fused silica/quartz (c., d. and e.) at 365nm

It’s pretty obvious that the glass slide is absorbing most if not all the 313nm light, and even the coverslip which is only 0.17mm thick is absorbing a lot of it. The quartz and UV fused silica components are on the other hand essentially transparent (other than a little bit of surface reflection reducing the effective transmission). At 365nm the story is different. Now the conventional glass slide and coverslip are transparent just like the quartz and UV fused silica ones. I also measured the transmission spectra through each of these using my Ocean Optics spectrometer and deuterium light source.

Transmission through the slides and coverslips

The transmission spectra back up what was seen in the UV images. I can measure down to 250nm with my system, but the quartz and UV fused silica will go on transmitting well below that.

Looking at the results above you may be thinking that the conventional glass slide and coverslip will be fine for UVA imaging at around 365nm. Well, yes and no, and it depends on how you set up your filters, lighting and camera in the system. In addition to how they transmit light you need to consider how they might fluoresce under UV light. To test this required a slightly different setup. The same light source was used, but now the 313nm or 365nm filter was put in front of the light source. The room was completely dark, so the only light came from fluorescence caused by the UV. The samples were placed inside a box painted with Semple Black 2.0 paint (which has high UV absorption and low fluorescence). Imaging was done with a conventional Canon EOS 5DSR camera and 105mm lens, and a 420nm long pass filter (to remove any light not caused by fluorescence).

First, the fluorescence image when illuminated under 313nm light.

Fluorescence at 313nm

And now when illuminated using 365nm light.

Fluorescence at 365nm

At 313nm, the glass slide and coverslip (a. and b.) both fluoresce and emit visible light. Interestingly they are emitting different wavelengths, and even though the coverslip is thin, its fluorescence is very bright. Under 365nm light the glass slide still fluoresces, but now the coverslip looks dark. Very interesting, not only do the normal glass components fluoresce but it is wavelength dependent. Also the specific glass slide and coverslip you have will impact how much it fluoresces, so it pays to shop around. Typically higher priced and higher quality glass will have fewer impurities and lower fluorescence, but that is not a hard and fast rule.

You can also see lots of blue dots in the image, especially with the 365nm irradiation. This is dust from clothes which contains optical brighteners from laundry detergents. It is the bane of UV fluorescence photographers. Rooms which looks clean under visible light, light up like a Christmas tree under UV light due to this dust. It give an overall blue ‘hue’ to the image at 365nm. The quartz and UV fused silica components are effectively non-fluorescent at either wavelength.

The quartz and UV fused silica components offer great transmission, and are non-fluorescent under UV. Why not just use these instead of glass slides whenever working with UV? Well, they have one major drawback, and that is cost. The glass slides and coverslips cost a few pence each. Depending on what they are being used for they can be thought of as disposable – use once and throw away. Anyone who’s ever tried cleaning coverslips will understand why this is the case. The quartz and UV fused silica components are certainly not disposable. The 1mm quartz microscope slides cost around 13GBP each, the 0.35mm thick coverslips also about 13GBP each, and the 0.17mm thick coverslips around 36GBP each!!! Overall, you’re looking at the order of 100x to 1000x the cost of glass equivalents. With that in mind these are not disposable items. The thought of trying to clean a 24mm diameter 0.17mm thick coverslip after use fills me with dread……

UV microscopy presents some unique challenges that visible light imaging does not. Even the choice of things such as the slide or coverslip you use, which may seem inconsequential or incidental under visible light, become vital to consider, especially when looking at short wavelength UV imaging. In fact every component of the optical train needs to be optimised, modified and tested when doing UV imaging and microscopy. If you want to know more about this or any other aspect of my work, you can reach me here.

UV transmission of Zeiss Luminar lenses

In the world photomacrography the Zeiss Luminar lenses have an almost mythical status. Originally intended for use in their Ultraphot range of microscopes, they have the ability to form a very large image circle – enough to cover a 4″ x 5″ plate – when used at their specified magnification range, and to do that without additional eyepiece optics. Available in the range of focal lengths (16mm, 25mm, 40mm, 63mm and 100mm) and with a number of different versions depending on when they were made, they offer extremely high sharpness and resolution, even compared to modern lenses.

A few months ago I bought one of these lenses – the 25mm one – and was really impressed by it (see here). In addition to being a really sharp lens, it also had great UV transmission. This got me wondering whether the other Luminars could also be used for UV imaging work. The 100m one I got was a great macro lens, but did not work that well for UV, as it had poor transmission (you can read about that here). The other Luminars do come up for sale on eBay reasonably, and they command high prices (often too high, as some of them stay ‘for sale’ for a long time). However a few days ago a friend of mine contacted me to say he had three of them in 16mm, 40mm and 63mm for sale. The price was right and they arrived here yesterday. Along with the other 2 I already had, these completed the set. And here they are….

The 5 Zeiss Luminar lenses

While there is some anecdotal information on their UV capabilities, I had not seen any actual data comparing all five of them for transmission. So, that was my first job, using my own lens transmission rig.

Luminar lens transmission between 280nm and 420nm

This revealed some interesting findings. The 25mm reached the farthest into the UV, and the 100mm showed the least UV transmission. The 16mm one is the 2nd worst. This one has a relatively complex lens design so its behaviour makes sense (5 elements, 4 groups). I had expected the 40mm and 63mm ones to be better than the 25mm one, as they have fewer elements (3 elements, 3 groups, vs 4 elements, 3 groups) but this was not the case. These are minor points though – the 16mm, 25mm, 40mm and 63mm ones all give good UV transmission for the majority of photographic purposes where it is mainly UVA that is being imaged.

Note, the 16mm and 25mm ones are marked with an * in the graph as the apertures for those are very small, and I suspect might be clipping the light beam slightly during the measurement. Therefore the absolute transmission for those are likely slightly higher than in the graph, bringing them in line with the other three. This does not impact how far into the UV they transmit though.

Overall, the 16mm to 63mm ones all look to offer a good to degree of UV transmission especially for UVA imaging, so I’ll definitely be using these in future for macro and UV work. They also have RMS threads and fit my Olympus microscope, so I will use them for some microscopy too.

The story doesn’t quite stop there though. When the Luminars were in use on the Ultraphot microscopes, they also had a set of spectacle lens condensers that went along with them – one for each Luminar lens. The same day I was offered the 16mm, 40mm, and 63mm lenses, I came across an advert on eBay for a set of the 5 condensers which I had never seen before. Here they are.

Zeiss Luminar condenser lenses

Each one of these has a removable clip on diaphragm.

Diaphragm removed

When it came to UV transmission for them I expected them to all be about the same, perhaps with slight variations as a function of glass thickness. Turns out they are not though.

Luminar condenser lens transmission between 280nm and 420nm

The condenser for the 16mm Luminar reaches much further into the UV than the others, and the one for the 25mm Luminar has the highest cutoff. The others are about the same. As I’m currently building a UV microscope, the Condenser for the 16mm Luminar has about the best reach into the UV that I have seen so far and I’ll try that one out. However these are a different diameter to my Olympus microscope condenser mount, so I’ll need a little adapter to be made up to use them.

I went into this assuming the 40mm and 63mm Luminar lenses would have better UV transmission than the 25mm given their simpler optical designs. I also assumed that that the condenser lenses would all be about the same. As we all know though ‘assume’ makes an ass out u and me. Just goes to show that it’s hard to predict lens behaviour in the UV, and that testing is the only real answer. If you’d like to know more about this or any other aspect of my work, you can reach me here.

Project Beater – Melanin imaging in human skin

Melanin acts a primary skin defense against UV, helping to absorb it before it can reach too far into the skin. I was intrigued by what skin with a high melanin content would like like under the microscope and recently managed to find a prepared slide of highly pigmented skin (I’m guessing Fitzpatrick V or VI) and wanted to share some images, as they nicely show the melanin.

These were taken on my Olympus BHB (affectionately named Project Beater, given the state it was in when I bought it). The light source was just the standard tungsten filament bulb, and the images are all bright field. Objectives between 4x and 63x were used, and approximate scale bars included in the images (which are just single shots, no focus stacking). Camera was a Nikon d850 monochrome conversion, with no filtration. Here are the images;

Pigmented skin cross section with 4x objective
Pigmented skin cross section with 10x objective
Pigmented skin cross section with 16x objective
Pigmented skin cross section with 63x objective

As can be seen in the 4x image, the skin sample includes the stratum corneum (top on the image), and the viable epidermis, the dermis and the subcutaneous tissue. At the bottom of the viable epidermis, where it interfaces with the dermis, there is a really dark layer. This is where the melanocytes are present, and they produce the melanosomes (the pigmented melanin granules). These melasomes are then transferred into the keratinocytes, which through the process of division and differentiation are pushed upwards and eventually form the corneocytes of the Stratum Corneum, taking the melanin with them.

In the image with the 63x objective we are now looking at the top layer of the skin, the flattened corneocytes of the Stratum Corneum. At this magnification you can see individual and clusters of melanosomes, which appear as black dots in the image. Amazingly these are sub micro in size – literature gives sizes of a few hundred nanometers across for them.

The images here were taken with normal visible light lighting. It’ll be interesting to come back to this slide at some point with UV imaging as melanin absorbs more light at shorter wavelengths. I’d also like to try some higher magnification images with focus stacking to see if there is more detail to be had with the melanin granules.

Microscopy opens a window into worlds we cannot see with the naked eye, and the more I research it the more I am fascinated by the images it can produce. Thanks for reading, and if you want to know more about this or other aspects of my work, I can be reached here.

UV Microscopy – Photoeyepiece choice

Building a UV transmission microscope presents some unique challenges above and beyond those for visible light microscopy, especially around the availability of materials for lenses and mirrors in the UVB and C regions. Normal glass absorbs short wavelength UV, and the coatings and adhesives used in making visible light lenses often do too. As discussed in my post here, as I pull together parts for my UV microscope I’ll be sharing my findings on my site, in case others are thinking of trying this out.

Todays piece is about photoeyepieces. On my Olympus BHB it has a trinocular head to which I can attach a camera. To do this, it requires a photoeyepiece, which slides into the tube on the top of the head. The camera body can then be attached with an adapter tube and images taken without the need for any additional lenses. The Olympus photoeyepiece I have is great for visible light images, but I was concerned about its transmission in the UV, and in fact some early tests showed that to be correct. While looking around on eBay, I came across Lomo UV photoeyepieces from a few different vendors in Russia. Given the Lomo UV objectives show good transmission even at short wavelength UV, I wondered whether their UV photoeyepieces would also be good. I bought a selection of them for about 30USD each and after a 2-3 month wait they arrived. Some of them are corrected for specific objectives (to help correct the abberations in the objectives) and one was just marked as 8x. They are shown below.

Lomo corrected UV photoeyepieces
Lomo 8x UV photoeyepiece

The first thing was to measure their transmission in the UV and compare it to the Olympus one that I have. I did this using the lens transmission system I’ve built (discussed here), and the results are shown below.

Photoeyepiece lens transmission in the UV

Well, the Olympus one really is not good for UV – transmission starts dropping at around 400nm, and by 330nm is basically zero. The Lomo UV ones however are very different – transmission doesn’t really drop even down at 280nm. I suspect these are quartz and would therefore be good down to around 220nm. Note the Lomo spectra are a bit noiser than the Olympus one, as I used slightly less smoothing during the scans for them. Ok, so that’s the first hurdle crossed – they transmit UV. Next though, is will they make an image on my microscope that I can photograph?

To answer this I used a slide of a section of scalp skin, and set up my monochrome converted Nikon d850 camera on the microscope, along with the Leitz 16x UV objective. I took images of the slide using a normal tungsten light source (this is not a test of UV imaging, just of whether they can create an image, if they work for this they should be fine for UV given the transmission results above) with the different eyepieces. Images are shown as full frame photos. Firstly, the Olympus one.

Scalp image with Olympus 3.3x NFK photoeyepiece

With the Olympus photoeyepiece I get a good image of the hair root bulbs in the scalp which covered the whole frame of the image. With the 3x Lomo UV ones, I got something very different though, and an example image is shown below.

Lomo UV 3x photoeyepiece (corrected for 75x objective)

The Lomo 3x photoeyepieces which were corrected for specific objectives did not cover the whole frame of the camera sensor now, although the bit that I could see was a similar field of view to the Olympus. The different Lomo 3x photoeyepieces all behaved similarly but with slight variations in the size of the image circle. One the plus point they all gave usable images. Of course the images would need cropping, but with something like a Nikon d850 with high resolution, that would not be a problem and they would still give usable images.

The Lomo 8x eyepiece was different to the others, as shown below.

Lomo 8x UV photoeyepiece image

The Lomo 8x UV photoeyepiece produced an image which covered the sensor of the camera, and was actually only slightly more magnified than the Olympus 3.3x, and will be a good option for use. It is however filthy as can be seen from the dirt in the image, so will need a good clean before using again.

The Lomo UV photoeyepieces have passed their second test – can they produce usable images on my Olympus BHB. Yes, some of them have their issues such as the reduced image size, but given their transmission in the UV this is a small price to pay, and I look forward to trying UV imaging with them.

The development of a UV transmission microscope presents some significant challenges, especially for imaging in the UVB region and below. Knowing a bit about how other manufacturers have solved problems, and being willing to try to adapt other equipment to solve problems is a key part of the research process. Having now identified some UV suitable photoeyepieces for my microscope, I can tick off one of the aspects of the build.

Thanks for reading, and if you want to know more about this or any other aspect of my work, you can reach me on my Contact Me page here.

UV Microscopy – custom UV light source fittings

Using an old microscope for research has good and bad points. Good points include build quality and ease of working on them. Bad points include lack of spare parts and add ons. As I was tracking down UV lights for mine, I was struggling to get what I needed here in the UK, basically because it is now 40 years old. One thing in particular that I was after was a 100W mercury light source, for fluorescence and transmission imaging. I managed to find a couple of different Olympus lamps (with cables different fittings), but no power supply. However I did find a 50W Zeiss mercury lamp and power supply for not much money. Zeiss lamps though do not fit my old Olympus, so how to get it to work? This is where knowing a good machine shop becomes vital…..

The Zeiss lamp I found had a larger fitting than the Olympus, and unlike the Olympus was male. So I needed a female to female adapter which reduced in diameter. I drew up some plans and approached Machined Precision Components Ltd in Watton, Norfolk to make them for me. 3 weeks later and two items arrived (below).

Adapter for Zeiss 50W mercury lamp
Adapter for mercury light for transmission measurement

The two adapters do different jobs. The first one allows me to attach the Zeiss lamp to the Olympus fluorescence imaging setup. The second one allows me to use the lamp for UV transmission microscopy as well, and as I got both of them done at once it saved on postage (once a Yorkshireman, always a Yorkshireman).

MPC’s work was top notch and everything fit really well. Here’s the adapter being used to fit the Zeiss lamp onto the microscope.

MPC adapter in use

The adapter allows me to use this 50W Zeiss lamp instead of the original Olympus 100W one, which is very handy as the replacement bulbs are cheaper for the Zeiss, and as each bulb costs more than the adapter did this is useful.

Does it work? Well yes it does. Here’s a fluorescence image of a skin sample showing a hair root under blue/UV induced fluorescence.

Fluorescence image of hair root

And also the incoming light being focused on to the microscope slide.

Light being focused onto the microscope slide

Repairing and renovating old equipment can be very cost effective for research, however sometimes parts will need to be made if you are combining equipment from different manufacturers. Knowing a good machinist is a key part of any researchers contacts when rebuilding old equipment. Thanks for reading, and if you want to know more about this or my other research areas, you can reach me here.

UV Microscopy – component considerations, and condenser choice

Since starting some microscopy as a bit of project to keep me occupied during the Covid-19 lock down, I got to thinking about building a UV transmission microscope. This would ideally be something I could use down to and even below 300nm and be able to select the wavelengths I could image with. This has obvious application for sunscreen formulation imaging – looking at the distribution of UVA and UVB actives in the product for instance – and also in the imaging of skin as well as forensics, botany, and even archaeology. I even started to have a go at it, here, when I did some rudimentary UV microscopy of a thin film of sunscreen on a slide. The issue with that though was that other than the objective it wasn’t using a system designed for UV imaging. Why is that a problem, why not just use a standard microscope? The biggest issue is that things which are transparent in the visible region aren’t necessarily transparent in the UV, especially at the shorter wavelength end of the spectrum. As you can imagine, if the lenses you are using are not letting any light through, then it’s going to be pretty hard to use them for imaging.

This leads me to the key question – what would it take to build a UV transmission microscope, something suitable for multispectral imaging down to 300nm and even below? I’ll share my thoughts as I go about the process, as it turns out there are quite a few considerations. Of course I could go ahead and buy a ready made UV transmission microscope, and I’ve come across a few companies that seem to offer them. I have not however even bothered checking the prices. Even if they were willing to provide a quote for me, the systems would cost tens if not hundreds of thousands of GBP. This sends me down the DIY route, and either sourcing or adapting components to do the job.

As I have already seen with my sunscreen imaging, doing UV transmission microscopy in the 365-400nm region is certainly doable with my normal microscope, however as mentioned above it is certainly not optimised for it. Also going to shorter wavelengths isn’t possible with the standard microscope due to the current optics absorbing the light. This means rethinking what to use for the condenser, the photoeyepiece, the internal focusing optics of the microscope itself, the filtration, the light source, even the choice of slide and coverslip, to try and maximise light throughput to the camera. If even one of these blocks the UV, then it won’t reach the camera, so all have to be assessed and changed. As you can imagine, this is not going to be an overnight fix, and I wont be covering everything in todays post.

Let’s break this down into chunks, and start addressing the problem. The condenser does a vital job of focusing the light onto the subject. This, then obviously needs to be able to transmit the UV. In my sunscreen imaging work, I just used the standard Olympus Abbe condenser in the microscope. It’s a very basic design, but for UV transmission often simpler is better. I also have an Olympus BH-AAC Aplanat Achromat condenser which is much higher optical quality. While hunting around on eBay, I came across a Reichert UV condenser for sale in Russia. Reichert (based in Vienna) made some extremely high quality microscopes, and given this said ‘UV’ on it, and that the vendor didn’t want to much for it, made it an obvious candidate for testing. Here’s a picture of the Reichert UV condenser.

Reichert UV condenser

When it arrived I measured the transmission from 280nm to 420nm through all three condensers, and I got the following curves.

Transmission between 280nm and 420nm for the 3 condensers

So what is going on here? The BH-AAC Aplanat is letting very little UV through, so is obviously no good for UV imaging. Not a huge surprise, as it has multiple elements, and is likely coated to optimise visible light transmission. The standard Abbe condenser is actually pretty good for UV transmission down to about 350nm. Below that it tails off, and is pretty much blocking the UV below 320nm. This then was a lucky choice for my initial UV transmission microscopy work, but would obviously be no good for looking below 320nm. The Reichert UV condenser does let shorter wavelength light through than the Olympus Abbe condenser, but even this is blocking almost everything below 300nm. It’s a shame, as I thought with the name ‘UV’ this might have been better. Yes, it could potentially be used at 320nm, but not really much lower. In hind sight I should have realised that this was still a glass condenser, and was not going to be any use below 300nm, but c’est la vie…..

None of the tested condensers are really useful for the ‘low 300’s nm’ region of UV. So where does this leave me? I could get a custom made UV condenser, which is an option but not a cheap one. Another option was to look for a quartz condenser from an old microscope. Quartz condensers should have good transmission down to around 200nm. But they are not common, in fact they are very rare.

I actually found an antique Zeiss quartz condenser for sale in the US, and after putting in an offer on it managed to buy it. It is currently in the US waiting for a time when flying gets back to normal and I can collect it. I shall update on that when I finally get hold of it for testing.

In the mean time while I am waiting for the quartz condenser, there are plenty of other aspects of the UV microscope design to test and optimise. As mentioned above, this will not be a quick project, and I’ll update the progress on it as and when I can. A lot of the information I put in here which cover things like transmission through lenses and objectives, is not available elsewhere, and I am sharing this in case it of of use to anyone else venturing down this road. Ideally I’d like to find another Olympus BHB which I can use a donor for the project, rather than risk damaging mine while I convert the internal optics. If you want to know more about this (and you have an Olympus BHB you’d like to donate, hint, hint), or any other aspect of my research, you can reach me here. Thanks for reading, and happy sciencing…..

Project Beater – Microscopy of antique skin slide

With my research interests in skin it was only a matter of time before I tried microscopy on a sample of it. Normally with skin sections they are stained to help bring out different parts of them. I wanted to try and see what an unstained sample looked like (the plan eventually is to look at it with UV, but that is a story for another day). Rather than using a new slide, I thought an antique one might be better and be unstained. I found an Edmund Wheeler slide of skin on ebay, and after a brief wait for the postal service to do its thing it arrived for imaging. Here’s the slide.

Edmund Wheeler slide of human skin

Edmund Wheeler (1808-1884) is a well known preparer of microscope slides. Indeed his work is often counterfeited, although I am reasonably confident that this one is not a fake and is probably around 150 years old. As you can see in the middle of the slide is a large section of skin which looks slightly dark against the white background. How does it look under the microscope? Firstly with normal bright field imaging. This was with a 10x Olympus UVFL objective and a tungsten light source and a scale bar is included.

Section of skin, bright field with 10x objective

It’s pretty obvious with bright field imaging and an unstained skin sample, it is difficult to see anything. You can just about make out the edge of the skin, and that is about it for structures.

Switch to phase contrast and everything becomes clearer. This is the same region, but now with a 10x phase contrast objective and lighting.

Section of skin, phase contrast with 10x objective

Using phase contrast a structure appears in the middle of the image, with the corkscrew cross section of a sweat gland. In fact looking around the sample there were a few of these features moving down into the skin from the surface. There are also different layers of the skin which are clearly defined, so I’ll be exploring that more in the future.

Microscopy is an amazing tool for exploring the natural world, but as with all imaging techniques, choosing the right setup is key to actually being able to see what you are interested in. Here, phase contrast imaging has revealed features of an unstained skin sample not possible to view using standard bright field imaging. If you’d like to know more about this or my other research you can contact me here. Thanks for reading.